I may be slow to respond.
Comp. biologist and data engineer. I study complex microbial communities and build pipelines/algorithms for their analysis.
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Tahoe Bio
- San Francisco
- http://www.microbiome.ninja
- https://orcid.org/0000-0002-5888-3702
- @SunitJain
Pinned Loading
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bioCurator
bioCurator PublicMemory-augmented multi-agent system for scientific literature curation and analysis.
Python
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FischbachLab/ninjaMap
FischbachLab/ninjaMap PublicCompute strain abundance in a defined microbial community
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tetramerFreqs/Binning
tetramerFreqs/Binning PublicScripts required to calculate tetramer frequencies and create input files for ESOM. See: Dick, G.J., A. Andersson, B.J. Baker, S.S. Simmons, B.C. Thomas, A.P. Yelton, and J.F. Banfield (2009). Comm…
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LiteratureReviewBot
LiteratureReviewBot PublicCreate a bot that scans pubmed literature and github for publications related to a topic and summarizes them in a table.
Python
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