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1. pybioinfo pybioinfo Public

   Scripts to be used as a bioinformatician, currently in microbiology field.

   Python

2. IBL-bioinfo/IBL-bioinformatics-wiki IBL-bioinfo/IBL-bioinformatics-wiki Public

   Source code for Wikipedia pages designed for bioinformatics enthusiasts at IBL, Univ. Leiden. A resource for learning and collaboration in the field.

   3

3. oleveler oleveler Public

   This is mirror repository of https://gitlab.services.universiteitleiden.nl/duc/oleveler

   Jupyter Notebook

4. IBL-bioinfo/sync-with-rclone IBL-bioinfo/sync-with-rclone Public

   A wrapper of rclone for each folder. Essentially minimize syncing workload for the person. After setting it up, syncing become just `./sync-with-rclone.sh push` or `pull`.

   Shell 1

5. NPDC_specific_cblaster_analogue NPDC_specific_cblaster_analogue Public

   Since NPDC (Natural Products Discovery Center at UF Scripps) has strong restrictions for downloading their database, I developed a work around to do "cblaster", by processing BLASTp result from NPD…

   Python 1

6. py-chipseq-plot-peak-macs3pileup py-chipseq-plot-peak-macs3pileup Public

   Plot ChIP-Seq peaks on genome with annotations

   Python