Make OME-Zarr default save format#1209
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Switch the primary save format to OME‑Zarr and add support for writing acquisitions in the canonical OME‑NGFF layout. Added an OMEZarrV3 writer and storage adapter (src/navigate/model/data_sources/ome_zarr_writer.py, storage_adapter.py), updated zarr data-source and pyramidal handling to honor OMEZarrParameters and legacy BDVParameters, and wired UI/config layers to expose OME‑Zarr settings (acquire_bar, config, example YAMLs). Documentation updated to recommend OME‑Zarr and describe the new layout, and pyproject dependencies/pyversions were bumped to require newer zarr and ome-zarr-models. Tests adjusted/added for the storage adapter and zarr metadata. Backwards compatibility: legacy BDVParameters are migrated to the new OMEZarrParameters where possible.
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Switch the primary save format to OME‑Zarr and add support for writing acquisitions in the canonical OME‑NGFF layout. Added an OMEZarrV3 writer and storage adapter (src/navigate/model/data_sources/ome_zarr_writer.py, storage_adapter.py), updated zarr data-source and pyramidal handling to honor OMEZarrParameters and legacy BDVParameters, and wired UI/config layers to expose OME‑Zarr settings (acquire_bar, config, example YAMLs). Documentation updated to recommend OME‑Zarr and describe the new layout, and pyproject dependencies/pyversions were bumped to require newer zarr and ome-zarr-models. Tests adjusted/added for the storage adapter and zarr metadata. Backwards compatibility: legacy BDVParameters are migrated to the new OMEZarrParameters where possible.