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Lempel-Ziv Decomposition, lzd

Description

The program lzd demonstrates the Lempel-Ziv decomposition and the match factor decomposition used in macle. It is based on a modern algorithm for calculating the Lempel-Ziv decomposition and shows the internal data structures used by the algorithm, including the suffix array.

Author

Bernhard Haubold, haubold@evolbio.mpg.de

Make the Program

Make sure you've installed the package libdivsufsort-dev. Then execute

$ make

The directory bin now contains the program lzd.

License

GNU General Public License

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