Skip to content
@EarlhamInst

Earlham Institute

BBSRC-supported life science research institute in Norwich, UK

Popular repositories Loading

  1. KAT KAT Public

    The K-mer Analysis Toolkit (KAT) contains a number of tools that analyse and compare K-mer spectra.

    C++ 222 51

  2. NanoOK NanoOK Public

    Forked from richardmleggett/NanoOK

    Analysis tool for Nanopore sequencing data

    Java 34 8

  3. RAMPART RAMPART Public

    A configurable de novo assembly pipeline

    Java 28 6

  4. 361Division 361Division Public

    361 Division - Scientific Training, Education and Learning

    R 28 31

  5. kontaminant kontaminant Public

    Tool to look for contaminants, with a kmer database.

    C 15 5

  6. earlham-galaxytools earlham-galaxytools Public

    Galaxy tools and workflows developed at the Earlham Institute

    Python 14 15

Repositories

Showing 10 of 165 repositories
  • grassroots-service-field-pathogenomics Public

    The Grassroots service for geolocation and dates of samples of crop pathogenomic data

    EarlhamInst/grassroots-service-field-pathogenomics’s past year of commit activity
    C 2 Apache-2.0 1 0 0 Updated Feb 5, 2026
  • grassroots-build-tools Public

    Scripts to manage the building of the different Grassroots infrastructure components

    EarlhamInst/grassroots-build-tools’s past year of commit activity
    Shell 0 Apache-2.0 0 0 0 Updated Feb 5, 2026
  • grassroots-installer Public

    Tools to automate the installation of Grassroots

    EarlhamInst/grassroots-installer’s past year of commit activity
    Shell 0 Apache-2.0 0 0 0 Updated Feb 5, 2026
  • grassroots-core Public

    The core libraries of the Grassroots infratructure

    EarlhamInst/grassroots-core’s past year of commit activity
    C 1 Apache-2.0 0 0 0 Updated Feb 5, 2026
  • grassroots-service-field-trial Public

    A Grassroots service for storing the data for field trials

    EarlhamInst/grassroots-service-field-trial’s past year of commit activity
    C 2 Apache-2.0 0 0 0 Updated Feb 5, 2026
  • earlham_cellxgene Public

    reusable dockerised instance of cellxgene with custom landing page to select between single cell datasets

    EarlhamInst/earlham_cellxgene’s past year of commit activity
    Python 0 0 0 0 Updated Feb 4, 2026
  • eisca Public

    A single-cell RNA-seq pipeline aimed at covering all analysis stages from quantification and clustering to tertiary analyses.

    EarlhamInst/eisca’s past year of commit activity
    Nextflow 3 MIT 1 2 0 Updated Feb 4, 2026
  • COPO-production Public

    COPO is a Django-based platform that serves as a metadata broker to describe research data per FAIR principles. It supports community-recognised metadata standards, ensuring data is discoverable, interoperable, and accessible. Submitted data is accessible via public repositories, promoting long-term preservation and reuse across systems.

    EarlhamInst/COPO-production’s past year of commit activity
    JavaScript 5 MIT 2 0 9 Updated Feb 4, 2026
  • eista Public

    A single-cell spatial transcriptomics pipeline aimed at covering all analysis stages from quantification and clustering to tertiary analyses.

    EarlhamInst/eista’s past year of commit activity
    Python 2 MIT 0 0 0 Updated Feb 4, 2026
  • rfparser Public

    Parse ResearchFish publications to update CKAN

    EarlhamInst/rfparser’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Feb 3, 2026
View all repositories

Top languages

Loading…

Most used topics

Loading…