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nnpde2diff2d.py
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2336 lines (1962 loc) · 82.8 KB
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"""
NNPDE2DIFF2D - Class to solve 2-D diffusion problems using a neural network
This module provides the functionality to solve 2-D diffusion problems using
a neural network.
Example:
Create an empty NNPDE2DIFF2D object.
net = NNPDE2DIFF2D()
Create an NNPDE2DIFF2D object for a PDE2DIFF2D object.
net = NNPDE2DIFF2D(pde2diff2d_obj)
Create an NNPDE2DIFF2D object for a PDE2DIFF2D object, with 20 hidden
nodes.
net = NNPDE2DIFF2D(pde2diff2d_obj, nhid=20)
Attributes:
TBD
Methods:
train
run
run_gradient
run_laplacian
Todo:
* Expand base functionality.
"""
###############################################################################
from math import sqrt
import numpy as np
from scipy.optimize import minimize
from diff2dtrialfunction import Diff2DTrialFunction
from kdelta import kdelta
from pde2diff2d import PDE2DIFF2D
from sigma import sigma, dsigma_dz, d2sigma_dz2, d3sigma_dz3
from slffnn import SLFFNN
# Default values for method parameters
DEFAULT_DEBUG = False
DEFAULT_ETA = 0.1
DEFAULT_MAXEPOCHS = 100
DEFAULT_NHID = 10
DEFAULT_TRAINALG = 'delta'
DEFAULT_UMAX = 1
DEFAULT_UMIN = -1
DEFAULT_USE_HESSIAN = False
DEFAULT_USE_JACOBIAN = False
DEFAULT_VERBOSE = False
DEFAULT_VMAX = 1
DEFAULT_VMIN = -1
DEFAULT_WMAX = 1
DEFAULT_WMIN = -1
DEFAULT_OPTS = {
'debug': DEFAULT_DEBUG,
'eta': DEFAULT_ETA,
'maxepochs': DEFAULT_MAXEPOCHS,
'nhid': DEFAULT_NHID,
'umax': DEFAULT_UMAX,
'umin': DEFAULT_UMIN,
'use_hessian': DEFAULT_USE_HESSIAN,
'use_jacobian': DEFAULT_USE_JACOBIAN,
'verbose': DEFAULT_VERBOSE,
'vmax': DEFAULT_VMAX,
'vmin': DEFAULT_VMIN,
'wmax': DEFAULT_WMAX,
'wmin': DEFAULT_WMIN
}
# Vectorize sigma functions for speed.
# sigma_v = np.vectorize(sigma)
# dsigma_dz_v = np.vectorize(dsigma_dz)
# d2sigma_dz2_v = np.vectorize(d2sigma_dz2)
# d3sigma_dz3_v = np.vectorize(d3sigma_dz3)
class NNPDE2DIFF2D(SLFFNN):
"""Solve a 2-D diffusion problem with a neural network"""
# Public methods
def train(self, x, trainalg=DEFAULT_TRAINALG, opts=DEFAULT_OPTS,
options=None):
"""Train the network to solve a 2-D diffusion problem"""
my_opts = dict(DEFAULT_OPTS)
my_opts.update(opts)
if trainalg == 'delta':
self.__train_delta_debug(x, opts=my_opts)
elif trainalg in ('Nelder-Mead', 'Powell', 'CG', 'BFGS', 'Newton-CG'):
self.__train_minimize(x, trainalg, opts=my_opts, options=options)
else:
print('ERROR: Invalid training algorithm (%s)!' % trainalg)
exit(1)
# def run(self, x):
# """Compute the trained solution."""
# # Fetch the number n of input points at which to calculate the
# # output, and the number m of components of each point.
# n = len(x)
# m = len(x[0])
# # Fetch the number of hidden nodes in the neural network.
# H = len(self.w[0])
# # Get references to the network parameters for convenience.
# w = self.w
# u = self.u
# v = self.v
# # Compute the activation for each input point and hidden node.
# z = np.dot(x, w) + u
# # Compute the sigma function for each input point and hidden node.
# s = sigma_v(z)
# # Compute the network output for each input point.
# N = np.dot(s, v)
# # Compute the value of the trial function for each input point.
# Yt = np.zeros(n)
# for i in range(n):
# Yt[i] = self.__Ytf(x[i], N[i])
# # Return the trial function values for each input point.
# return Yt
def run_debug(self, x):
"""Compute the trained solution (debug version)."""
# Fetch the number n of input points at which to calculate the
# output, and the number m of components of each point.
n = len(x)
m = len(x[0])
# Fetch the number of hidden nodes in the neural network.
H = len(self.w[0])
# Get references to the network parameters for convenience.
w = self.w
u = self.u
v = self.v
# Compute the activation for each input point and hidden node.
z = np.zeros((n, H))
for i in range(n):
for k in range(H):
z[i, k] = u[k]
for j in range(m):
z[i, k] += w[j, k]*x[i, j]
# Compute the sigma function for each input point and hidden node.
s = np.zeros((n, H))
for i in range(n):
for k in range(H):
s[i, k] = sigma(z[i, k])
# Compute the network output for each input point.
N = np.zeros(n)
for i in range(n):
for k in range(H):
N[i] += v[k]*s[i, k]
# Compute the value of the trial function for each input point.
Yt = np.zeros(n)
for i in range(n):
Yt[i] = self.tf.Ytf(x[i], N[i])
# Return the trial function values for each input point.
return Yt
# def run_gradient(self, x):
# """Compute the trained gradient."""
# # Fetch the number n of input points at which to calculate the
# # output, and the number m of components of each point.
# n = len(x)
# m = len(x[0])
# # Fetch the number of hidden nodes in the neural network.
# H = len(self.w[0])
# # Get references to the network parameters for convenience.
# w = self.w
# u = self.u
# v = self.v
# # Compute the activation for each input point and hidden node.
# z = np.dot(x, w) + u
# # Compute the sigma function for each input point and hidden node.
# s = sigma_v(z)
# # Compute the sigma function 1st derivative for each input point
# # and hidden node.
# s1 = dsigma_dz_v(z)
# # Compute the network output for each input point.
# N = np.dot(s, v)
# # Compute the network output gradient for each input point.
# delN = np.dot(s1, (v*w).T)
# # Compute the gradient of the booundary condition function for each
# # input point.
# delA = np.zeros((n, m))
# for i in range(n):
# for j in range(m):
# delA[i, j] = self.delAf[j](x[i])
# # Compute the network coefficient function for each input point.
# P = np.zeros(n)
# for i in range(n):
# P[i] = self.__Pf(x[i])
# # Compute the gradient of the network coefficient function for each
# # input point.
# delP = np.zeros((n, m))
# for i in range(n):
# for j in range(m):
# delP[i, j] = self.delPf[j](x[i])
# # Compute the gradient of the trial solution for each input point.
# delYt = np.zeros((n, m))
# for i in range(n):
# for j in range(m):
# delYt[i, j] = delA[i, j] + P[i]*delN[i, j] + \
# delP[i, j]*N[i]
# return delYt
def run_gradient_debug(self, x):
"""Compute the trained gradient (debug version)."""
# Fetch the number n of input points at which to calculate the
# output, and the number m of components of each point.
n = len(x)
m = len(x[0])
# Fetch the number of hidden nodes in the neural network.
H = len(self.w[0])
# Get references to the network parameters for convenience.
w = self.w
u = self.u
v = self.v
z = np.zeros((n, H))
for i in range(n):
for k in range(H):
z[i, k] = u[k]
for j in range(m):
z[i, k] += w[j, k]*x[i, j]
s = np.zeros((n, H))
for i in range(n):
for k in range(H):
s[i, k] = sigma(z[i, k])
s1 = np.zeros((n, H))
for i in range(n):
for k in range(H):
s1[i, k] = dsigma_dz(z[i, k])
N = np.zeros(n)
for i in range(n):
for k in range(H):
N[i] += v[k]*s[i, k]
delN = np.zeros((n, m))
for i in range(n):
for j in range(m):
for k in range(H):
delN[i, j] += v[k]*s1[i, k]*w[j, k]
delYt = np.zeros((n, m))
for i in range(n):
delYt[i] = self.tf.delYtf(x[i], N[i], delN[i])
return delYt
# def run_hessian(self, x):
# """Compute the trained Hessian."""
# # Fetch the number n of input points at which to calculate the
# # output, and the number m of components of each point.
# n = len(x)
# m = len(x[0])
# # Fetch the number of hidden nodes in the neural network.
# H = len(self.w[0])
# # Get references to the network parameters for convenience.
# w = self.w
# u = self.u
# v = self.v
# # Compute the activation for each input point and hidden node.
# z = np.dot(x, w) + u
# # Compute the sigma function for each input point and hidden node.
# s = sigma_v(z)
# # Compute the sigma function 1st derivative for each input point
# # and hidden node.
# s1 = dsigma_dz_v(z)
# # Compute the sigma function 2nd derivative for each input point
# # and hidden node.
# s2 = d2sigma_dz2_v(z)
# # Compute the network output for each input point.
# N = np.dot(s, v)
# # Compute the network output gradient for each input point.
# delN = np.dot(s1, (v*w).T)
# # Compute the network output Hessian for each input point.
# deldelN = np.zeros((n, m, m))
# for i in range(n):
# for j in range(m):
# for jj in range(m):
# deldelN[i, j, jj] = np.dot(v, s2[i]*w[j]*w[jj])
# # Compute the Hessian of the boundary condition function
# # for each input point.
# deldelA = np.zeros((n, m, m))
# for i in range(n):
# for j in range(m):
# for jj in range(m):
# deldelA[i, j, jj] = self.deldelAf[j][jj](x[i])
# # Compute the network coefficient function for each input point.
# P = np.zeros(n)
# for i in range(n):
# P[i] = self.__Pf(x[i])
# # Compute the gradient of the network coefficient function for each
# # input point.
# delP = np.zeros((n, m))
# for i in range(n):
# for j in range(m):
# delP[i, j] = self.delPf[j](x[i])
# # Compute the Hessian of the network coefficient function for each
# # input point.
# deldelP = np.zeros((n, m, m))
# for i in range(n):
# for j in range(m):
# for jj in range(m):
# deldelP[i, j, jj] = self.deldelPf[j][jj](x[i])
# # Compute the Hessian of the trial solution for each
# # input point.
# deldelYt = np.zeros((n, m, m))
# for i in range(n):
# for j in range(m):
# for jj in range(m):
# deldelYt[i, j, jj] = deldelA[i, j, jj] + \
# P[i]*deldelN[i, j, jj] + delP[i, jj]*delN[i, j] + \
# delP[i, j]*delN[i, jj] + deldelP[i, j, jj]*N[i]
# return deldelYt
def run_laplacian_debug(self, x):
"""Compute the trained Laplacian (debug version)."""
n = len(x)
m = len(x[0])
H = len(self.w[0])
w = self.w
u = self.u
v = self.v
z = np.zeros((n, H))
for i in range(n):
for k in range(H):
z[i, k] = u[k]
for j in range(m):
z[i, k] += w[j, k]*x[i, j]
s = np.zeros((n, H))
for i in range(n):
for k in range(H):
s[i, k] = sigma(z[i, k])
s1 = np.zeros((n, H))
for i in range(n):
for k in range(H):
s1[i, k] = dsigma_dz(z[i, k])
s2 = np.zeros((n, H))
for i in range(n):
for k in range(H):
s2[i, k] = d2sigma_dz2(z[i, k])
N = np.zeros(n)
for i in range(n):
for k in range(H):
N[i] += v[k]*s[i, k]
delN = np.zeros((n, m))
for i in range(n):
for j in range(m):
for k in range(H):
delN[i, j] += v[k]*s1[i, k]*w[j, k]
del2N = np.zeros((n, m))
for i in range(n):
for j in range(m):
for k in range(H):
del2N[i, j] += v[k]*s2[i, k]*w[j, k]**2
del2Yt = np.zeros((n, m))
for i in range(n):
del2Yt[i] = self.tf.del2Ytf(x[i], N[i], delN[i], del2N[i])
return del2Yt
# Internal methods below this point
def __init__(self, eq, nhid=DEFAULT_NHID):
super().__init__()
self.eq = eq
self.tf = Diff2DTrialFunction(eq.bcf, eq.delbcf, eq.del2bcf)
m = len(eq.bcf)
self.w = np.zeros((m, nhid))
self.u = np.zeros(nhid)
self.v = np.zeros(nhid)
# Pre-vectorize functions for efficiency.
# Gather trial function derivatives.
# self.delAf = (self.__dA_dxf, self.__dA_dtf)
# self.deldelAf = ((self.__d2A_dxdxf, self.__d2A_dxdtf),
# (self.__d2A_dtdxf, self.__d2A_dtdtf))
# self.delPf = (self.__dP_dxf, self.__dP_dtf)
# self.deldelPf = ((self.__d2P_dxdxf, self.__d2P_dxdtf),
# (self.__d2P_dtdxf, self.__d2P_dtdtf))
# <HACK>
self.nit = 0
self.res = None
# </HACK>
def __str__(self):
s = ''
s += "NNPDEDIFF2D:\n"
s += "%s\n" % self.eq
s += "w = %s\n" % self.w
s += "u = %s\n" % self.u
s += "v = %s\n" % self.v
return s.rstrip()
# def __train_delta(self, x, opts=DEFAULT_OPTS):
# """Train using the delta method, improved with numpy vector ops."""
# my_opts = dict(DEFAULT_OPTS)
# my_opts.update(opts)
# # Sanity-check arguments.
# assert x.any()
# assert my_opts['maxepochs'] > 0
# assert my_opts['eta'] > 0
# assert my_opts['vmin'] < my_opts['vmax']
# assert my_opts['wmin'] < my_opts['wmax']
# assert my_opts['umin'] < my_opts['umax']
# # ---------------------------------------------------------------------
# # Change notation for convenience.
# n = len(x)
# m = 3 # <HACK>
# H = my_opts['nhid']
# # Create the hidden node weights, biases, and output node weights.
# self.w = np.random.uniform(my_opts['wmin'], my_opts['wmax'], (m, H))
# self.u = np.random.uniform(my_opts['umin'], my_opts['umax'], H)
# self.v = np.random.uniform(my_opts['vmin'], my_opts['vmax'], H)
# # Initial parameter deltas are 0.
# dE_dw = np.zeros((m, H))
# dE_du = np.zeros(H)
# dE_dv = np.zeros(H)
# # Create local references to the parameter arrays for convenience.
# # THESE ARE REFERENCES, NOT COPIES.
# w = self.w
# u = self.u
# v = self.v
# # Train the network.
# for epoch in range(my_opts['maxepochs']):
# if my_opts['debug']:
# print('Starting epoch %d.' % epoch)
# # Compute the new values of the network parameters.
# w -= my_opts['eta']*dE_dw
# u -= my_opts['eta']*dE_du
# v -= my_opts['eta']*dE_dv
# # Compute the net input, the sigmoid function and its derivatives,
# # for each hidden node and each training point.
# z = np.dot(x, w) + u
# s = sigma_v(z)
# s1 = dsigma_dz_v(z)
# s2 = d2sigma_dz2_v(z)
# s3 = d3sigma_dz3_v(z)
# # Compute the network output and its derivatives, for each
# # training point.
# N = np.dot(s, v)
# delN = np.dot(s1, (v*w).T)
# deldelN = np.zeros((n, m, m))
# for i in range(n):
# for j in range(m):
# for jj in range(m):
# deldelN[i, j, jj] = np.dot(v, s2[i]*w[j]*w[jj])
# dN_dw = v[np.newaxis, np.newaxis, :] * \
# s1[:, np.newaxis, :]*x[:, :, np.newaxis]
# dN_du = v*s1
# dN_dv = np.copy(s)
# d2N_dwdx = np.zeros((n, m, m, H))
# for i in range(n):
# for j in range(m):
# for jj in range(m):
# d2N_dwdx[i, j, jj] = v*(s1[i]*kdelta(j, jj) +
# s2[i]*w[jj]*x[i, j])
# d2N_dudx = v[np.newaxis, np.newaxis, :] * \
# s2[:, np.newaxis, :]*w[np.newaxis, :, :]
# d2N_dvdx = s1[:, np.newaxis, :]*w[np.newaxis, :, :]
# d3N_dwdxdy = np.zeros((n, m, m, m, H))
# for i in range(n):
# for j in range(m):
# for jj in range(m):
# for jjj in range(m):
# d3N_dwdxdy[i, j, jj, jjj] = \
# v * (s2[i]*(w[jjj]*kdelta(j, jj) + \
# w[jj]*kdelta(j, jjj)) + \
# s3[i]*w[jj]*w[jjj]*x[i, j])
# d3N_dudxdy = np.zeros((n, m, m, H))
# for i in range(n):
# for j in range(m):
# for jj in range(m):
# d3N_dudxdy[i, j, jj] = v*s3[i]*w[j]*w[jj]
# d3N_dvdxdy = np.zeros((n, m, m, H))
# for i in range(n):
# for j in range(m):
# for jj in range(m):
# d3N_dvdxdy[i, j, jj] = s2[i]*w[j]*w[jj]
# # Compute the value of the trial solution and its derivatives,
# # for each training point.
# A = np.zeros(n)
# for i in range(n):
# A[i] = self.__Af(x[i])
# delA = np.zeros((n, m))
# for i in range(n):
# for j in range(m):
# delA[i, j] = self.delAf[j](x[i])
# deldelA = np.zeros((n, m, m))
# for i in range(n):
# for j in range(m):
# for jj in range(m):
# deldelA[i, j, jj] = self.deldelAf[j][jj](x[i])
# P = np.zeros(n)
# for i in range(n):
# P[i] = self.__Pf(x[i])
# delP = np.zeros((n, m))
# for i in range(n):
# for j in range(m):
# delP[i, j] = self.delPf[j](x[i])
# deldelP = np.zeros((n, m, m))
# for i in range(n):
# for j in range(m):
# for jj in range(m):
# deldelP[i, j, jj] = self.deldelPf[j][jj](x[i])
# Yt = np.zeros(n)
# for i in range(n):
# Yt[i] = self.__Ytf(x[i], N[i])
# delYt = delA + P[:, np.newaxis]*delN + N[:, np.newaxis]*delP
# deldelYt = np.zeros((n, m, m))
# for j in range(m):
# for jj in range(m):
# deldelYt[:, j, jj] = deldelA[:, j, jj] + \
# P*deldelN[:, j, jj] + delP[:, jj]*delN[:, j] + \
# delP[:, j]*delN[:, jj] + deldelP[:, j, jj]*N
# dYt_dw = P[:, np.newaxis, np.newaxis]*dN_dw
# dYt_du = P[:, np.newaxis]*dN_du
# dYt_dv = P[:, np.newaxis]*dN_dv
# d2Yt_dwdx = np.zeros((n, m, m, H))
# for i in range(n):
# for j in range(m):
# for jj in range(m):
# d2Yt_dwdx[i, j, jj] = P[i] * d2N_dwdx[i, j, jj] + \
# delP[i, jj]*dN_dw[i, j]
# d2Yt_dudx = P[:, np.newaxis, np.newaxis]*d2N_dudx + \
# delP[:, :, np.newaxis]*dN_du[:, np.newaxis, :]
# d2Yt_dvdx = P[:, np.newaxis, np.newaxis]*d2N_dvdx + \
# delP[:, :, np.newaxis]*dN_dv[:, np.newaxis, :]
# d3Yt_dwdxdy = np.zeros((n, m, m, m, H))
# for i in range(n):
# for j in range(m):
# for jj in range(m):
# for jjj in range(m):
# for k in range(H):
# d3Yt_dwdxdy[i, j, jj, jjj, k] = \
# P[i]*d3N_dwdxdy[i, j, jj, jjj, k] + \
# delP[i, jjj]*d2N_dwdx[i, j, jj, k] + \
# delP[i, jj]*d2N_dwdx[i, j, jjj, k] + \
# deldelP[i, jj, jjj]*dN_dw[i, j, k]
# d3Yt_dudxdy = np.zeros((n, m, m, H))
# for i in range(n):
# for j in range(m):
# for jj in range(m):
# for k in range(H):
# d3Yt_dudxdy[i, j, jj, k] = \
# P[i]*d3N_dudxdy[i, j, jj, k] + \
# delP[i, j]*d2N_dudx[i, jj, k] + \
# delP[i, jj]*d2N_dudx[i, j, k] + \
# deldelP[i, j, jj]*dN_du[i, k]
# d3Yt_dvdxdy = np.zeros((n, m, m, H))
# for i in range(n):
# for j in range(m):
# for jj in range(m):
# for k in range(H):
# d3Yt_dvdxdy[i, j, jj, k] = \
# P[i]*d3N_dvdxdy[i, j, jj, k] + \
# delP[i, j]*d2N_dvdx[i, jj, k] + \
# delP[i, jj]*d2N_dvdx[i, j, k] + \
# deldelP[i, j, jj]*dN_dv[i, k]
# # Compute the value of the original differential equation
# # for each training point, and its derivatives.
# G = np.zeros(n)
# for i in range(n):
# G[i] = self.eq.Gf(x[i], Yt[i], delYt[i], deldelYt[i])
# dG_dYt = np.zeros(n)
# for i in range(n):
# dG_dYt[i] = self.eq.dG_dYf(x[i], Yt[i], delYt[i], deldelYt[i])
# dG_ddelYt = np.zeros((n, m))
# for i in range(n):
# for j in range(m):
# dG_ddelYt[i, j] = \
# self.eq.dG_ddelYf[j](x[i], Yt[i], delYt[i],
# deldelYt[i])
# dG_ddeldelYt = np.zeros((n, m, m))
# for i in range(n):
# for j in range(m):
# for jj in range(m):
# dG_ddeldelYt[i, j, jj] = \
# self.eq.dG_ddeldelYf[j][jj](x[i], Yt[i], delYt[i],
# deldelYt[i])
# dG_dw = np.zeros((n, m, H))
# for i in range(n):
# for j in range(m):
# for k in range(H):
# dG_dw[i, j, k] = dG_dYt[i]*dYt_dw[i, j, k]
# for jj in range(m):
# dG_dw[i, j, k] += \
# dG_ddelYt[i, jj]*d2Yt_dwdx[i, j, jj, k]
# for jjj in range(m):
# dG_dw[i, j, k] += dG_ddeldelYt[i, jj, jjj] * \
# d3Yt_dwdxdy[i, j, jj, jjj, k]
# dG_du = np.zeros((n, H))
# for i in range(n):
# for k in range(H):
# dG_du[i, k] = dG_dYt[i]*dYt_du[i, k]
# for j in range(m):
# dG_du[i, k] += dG_ddelYt[i, j]*d2Yt_dudx[i, j, k]
# for jj in range(m):
# dG_du[i, k] += dG_ddeldelYt[i, j, jj] * \
# d3Yt_dudxdy[i, j, jj, k]
# dG_dv = np.zeros((n, H))
# for i in range(n):
# for k in range(H):
# dG_dv[i, k] = dG_dYt[i]*dYt_dv[i, k]
# for j in range(m):
# dG_dv[i, k] += dG_ddelYt[i, j]*d2Yt_dvdx[i, j, k]
# for jj in range(m):
# dG_dv[i, k] += dG_ddeldelYt[i, j, jj] * \
# d3Yt_dvdxdy[i, j, jj, k]
# # Compute the partial derivatives of the error with respect to the
# # network parameters.
# dE_dw = np.zeros((m, H))
# for j in range(m):
# for k in range(H):
# for i in range(n):
# dE_dw[j, k] += 2*G[i]*dG_dw[i, j, k]
# dE_du = np.zeros(H)
# for k in range(H):
# for i in range(n):
# dE_du[k] += 2*G[i]*dG_du[i, k]
# dE_dv = np.zeros(H)
# for k in range(H):
# for i in range(n):
# dE_dv[k] += 2*G[i]*dG_dv[i, k]
# # Compute the error function for this epoch.
# E = np.sum(G**2)
# if my_opts['verbose']:
# rmse = sqrt(E/n)
# print(epoch, rmse)
def __train_delta_debug(self, x, opts=DEFAULT_OPTS):
"""Train using the delta method."""
my_opts = dict(DEFAULT_OPTS)
my_opts.update(opts)
# Sanity-check arguments.
assert x.any()
assert my_opts['maxepochs'] > 0
assert my_opts['eta'] > 0
assert my_opts['vmin'] < my_opts['vmax']
assert my_opts['wmin'] < my_opts['wmax']
assert my_opts['umin'] < my_opts['umax']
# Determine the number of training points, and change notation for
# convenience.
n = len(x) # Number of training points
m = len(self.eq.bcf) # Number of dimensions in a training point
H = my_opts['nhid'] # Number of hidden nodes
debug = my_opts['debug']
verbose = my_opts['verbose']
eta = my_opts['eta'] # Learning rate
maxepochs = my_opts['maxepochs'] # Number of training epochs
wmin = my_opts['wmin'] # Network parameter limits
wmax = my_opts['wmax']
umin = my_opts['umin']
umax = my_opts['umax']
vmin = my_opts['vmin']
vmax = my_opts['vmax']
# Create the hidden node weights, biases, and output node weights.
w = np.random.uniform(wmin, wmax, (m, H))
# print("w =", w)
u = np.random.uniform(umin, umax, H)
# print("u =", u)
v = np.random.uniform(vmin, vmax, H)
# print("v =", v)
# Initial parameter deltas are 0.
dE_dw = np.zeros((m, H))
dE_du = np.zeros(H)
dE_dv = np.zeros(H)
# Train the network.
for epoch in range(maxepochs):
if verbose:
print('Starting epoch %d.' % epoch)
# Compute the new values of the network parameters.
for j in range(m):
for k in range(H):
w[j, k] -= eta*dE_dw[j, k]
# print("w =", w)
print("min,max w =", np.amin(w), np.amax(w))
for k in range(H):
u[k] -= eta*dE_du[k]
# print("u =", u)
print("min,max u =", np.amin(u), np.amax(u))
for k in range(H):
v[k] -= eta*dE_dv[k]
# print("v =", v)
print("min,max v =", np.amin(v), np.amax(v))
# Compute the net input, the sigmoid function and its
# derivatives, for each hidden node and each training point.
z = np.zeros((n, H))
for i in range(n):
for k in range(H):
z[i, k] = u[k]
for j in range(m):
z[i, k] += w[j, k]*x[i, j]
# print("z =", z)
# print("min,max z =", np.amin(z), np.amax(z))
s = np.zeros((n, H))
for i in range(n):
for k in range(H):
s[i, k] = sigma(z[i, k])
# print("s =", s)
# print("min,max s =", np.amin(s), np.amax(s))
s1 = np.zeros((n, H))
for i in range(n):
for k in range(H):
s1[i, k] = dsigma_dz(z[i, k])
# print("s1 =", s1)
# print("min,max s1 =", np.amin(s1), np.amax(s1))
s2 = np.zeros((n, H))
for i in range(n):
for k in range(H):
s2[i, k] = d2sigma_dz2(z[i, k])
# print("s2 =", s2)
# print("min,max s2 =", np.amin(s2), np.amax(s2))
s3 = np.zeros((n, H))
for i in range(n):
for k in range(H):
s3[i, k] = d3sigma_dz3(z[i, k])
# print("s3 =", s3)
# print("min,max s3 =", np.amin(s3), np.amax(s3))
# Compute the network output and its derivatives, for each
# training point.
N = np.zeros(n)
for i in range(n):
for k in range(H):
N[i] += s[i, k]*v[k]
# print("N =", N)
# print("min,max N =", np.amin(N), np.amax(N))
delN = np.zeros((n, m))
for i in range(n):
for j in range(m):
for k in range(H):
delN[i, j] += v[k]*s1[i, k]*w[j, k]
# print("delN =", delN)
# print("min,max delN =", np.amin(delN), np.amax(delN))
del2N = np.zeros((n, m))
for i in range(n):
for j in range(m):
for k in range(H):
del2N[i, j] += v[k]*s2[i, k]*w[j, k]**2
# print("del2N =", del2N)
# print("min,max del2N =", np.amin(del2N), np.amax(del2N))
dN_dw = np.zeros((n, m, H))
for i in range(n):
for j in range(m):
for k in range(H):
dN_dw[i, j, k] = v[k]*s1[i, k]*x[i, j]
# print("dN_dw =", dN_dw)
# print("min,max dN_dw =", np.amin(dN_dw), np.amax(dN_dw))
dN_du = np.zeros((n, H))
for i in range(n):
for k in range(H):
dN_du[i, k] = v[k]*s1[i, k]
# print("dN_du =", dN_du)
# print("min,max dN_du =", np.amin(dN_du), np.amax(dN_du))
dN_dv = np.zeros((n, H))
for i in range(n):
for k in range(H):
dN_dv[i, k] = s[i, k]
# print("dN_dv =", dN_dv)
# print("min,max dN_dv =", np.amin(dN_dv), np.amax(dN_dv))
d2N_dwdx = np.zeros((n, m, m, H))
for i in range(n):
for j in range(m):
for jj in range(m):
for k in range(H):
d2N_dwdx[i, j, jj, k] = \
v[k]*(s1[i, k]*kdelta(j, jj) + \
s2[i, k]*w[jj, k]*x[i, j])
# print("d2N_dwdx =", d2N_dwdx)
# print("min,max d2N_dwdx =", np.amin(d2N_dwdx), np.amax(d2N_dwdx))
d2N_dudx = np.zeros((n, m, H))
for i in range(n):
for j in range(m):
for k in range(H):
d2N_dudx[i, j, k] = v[k]*s2[i, k]*w[j, k]
# print("d2N_dudx =", d2N_dudx)
# print("min,max d2N_dudx =", np.amin(d2N_dudx), np.amax(d2N_dudx))
d2N_dvdx = np.zeros((n, m, H))
for i in range(n):
for j in range(m):
for k in range(H):
d2N_dvdx[i, j, k] = s1[i, k]*w[j, k]
# print("d2N_dvdx =", d2N_dvdx)
# print("min,max d2N_dvdx =", np.amin(d2N_dvdx), np.amax(d2N_dvdx))
d3N_dwdx2 = np.zeros((n, m, m, H))
for i in range(n):
for j in range(m):
for jj in range(m):
for k in range(H):
d3N_dwdx2[i, j, jj, k] = \
v[k]*(2*s2[i, k]*w[jj, k]*kdelta(j, jj) + \
s3[i, k]*w[j, k]**2*x[i, j])
# print("d3N_dwdx2 =", d3N_dwdx2)
# print("min,max d3N_dwdx2 =", np.amin(d3N_dwdx2), np.amax(d3N_dwdx2))
d3N_dudx2 = np.zeros((n, m, H))
for i in range(n):
for j in range(m):
for k in range(H):
d3N_dudx2[i, j, k] = v[k]*s3[i, k]*w[j, k]**2
# print("d3N_dudx2 =", d3N_dudx2)
# print("min,max d3N_dudx2 =", np.amin(d3N_dudx2), np.amax(d3N_dudx2))
d3N_dvdx2 = np.zeros((n, m, H))
for i in range(n):
for j in range(m):
for k in range(H):
d3N_dvdx2[i, j, k] = s2[i, k]*w[j, k]**2
# print("d3N_dvdx2 =", d3N_dvdx2)
# print("min,max d3N_dvdx2 =", np.amin(d3N_dvdx2), np.amax(d3N_dvdx2))
# Compute the value of the trial solution, its coefficients,
# and derivatives, for each training point.
P = np.zeros(n)
for i in range(n):
P[i] = self.tf.Pf(x[i])
# print("P =", P)
# print("min,max P =", np.amin(P), np.amax(P))
delP = np.zeros((n, m))
for i in range(n):
delP[i] = self.tf.delPf(x[i])
# print("delP =", delP)
# print("min,max delP =", np.amin(delP), np.amax(delP))
del2P = np.zeros((n, m))
for i in range(n):
del2P[i] = self.tf.del2Pf(x[i])
# print("del2P =", del2P)
# print("min,max del2P =", np.amin(del2P), np.amax(del2P))
Yt = np.zeros(n)
for i in range(n):
Yt[i] = self.tf.Ytf(x[i], N[i])
# print("Yt =", Yt)
# print("min,max Yt =", np.amin(Yt), np.amax(Yt))
delYt = np.zeros((n, m))
for i in range(n):
delYt[i] = self.tf.delYtf(x[i], N[i], delN[i])
# print("delYt =", delYt)
# print("min,max delYt =", np.amin(delYt), np.amax(delYt))
del2Yt = np.zeros((n, m))
for i in range(n):
del2Yt[i] = self.tf.del2Ytf(x[i], N[i], delN[i], del2N[i])
# print("del2Yt =", del2Yt)
# print("min,max del2Yt =", np.amin(del2Yt), np.amax(del2Yt))
dYt_dw = np.zeros((n, m, H))
for i in range(n):
for j in range(m):
for k in range(H):
dYt_dw[i, j, k] = P[i]*dN_dw[i, j, k]
# print("dYt_dw =", dYt_dw)
# print("min,max dYt_dw =", np.amin(dYt_dw), np.amax(dYt_dw))
dYt_du = np.zeros((n, H))
for i in range(n):
for k in range(H):
dYt_du[i, k] = P[i]*dN_du[i, k]
# print("dYt_du =", dYt_du)
# print("min,max dYt_du =", np.amin(dYt_du), np.amax(dYt_du))
dYt_dv = np.zeros((n, H))